Sequence 1: | NP_001188794.1 | Gene: | SC35 / 53444 | FlyBaseID: | FBgn0265298 | Length: | 195 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379856.1 | Gene: | rsp-4 / 173915 | WormBaseID: | WBGene00004701 | Length: | 196 | Species: | Caenorhabditis elegans |
Alignment Length: | 215 | Identity: | 115/215 - (53%) |
---|---|---|---|
Similarity: | 140/215 - (65%) | Gaps: | 40/215 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSNGGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 65
Fly 66 FAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRS- 129
Fly 130 ----RSRSPMRRRSRSPRRRSYSRSRSPGSH----SPERRSKFSRS-----PVRGD-------SR 174
Fly 175 NGIGSGSGGLAPAASRSRSR 194 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SC35 | NP_001188794.1 | RRM | <24..>100 | CDD:223796 | 49/75 (65%) |
RRM_SRSF2_SRSF8 | 25..97 | CDD:240757 | 47/71 (66%) | ||
rsp-4 | NP_001379856.1 | RRM_SRSF2_SRSF8 | 21..93 | CDD:409751 | 47/71 (66%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160162498 | |
Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I3993 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 185 | 1.000 | Inparanoid score | I2609 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG51897 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003650 | |
OrthoInspector | 1 | 1.000 | - | - | oto19835 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104633 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1169 |
SonicParanoid | 1 | 1.000 | - | - | X3014 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.830 |