Sequence 1: | NP_001188794.1 | Gene: | SC35 / 53444 | FlyBaseID: | FBgn0265298 | Length: | 195 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_542781.3 | Gene: | SRSF12 / 135295 | HGNCID: | 21220 | Length: | 261 | Species: | Homo sapiens |
Alignment Length: | 205 | Identity: | 79/205 - (38%) |
---|---|---|---|
Similarity: | 102/205 - (49%) | Gaps: | 49/205 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Fly 79 DALEAMDGRMLDGRELRVQMARYGR------------PSSPTRSSSGRRGGGGGGGSGGRRRSRS 131
Fly 132 RSPM----RRRSRS-----PRRRSYSRSRSPGSHSPER--RSKFSRSPVRGDSRNGIGSGSGGLA 185
Fly 186 PAASRSRSRS 195 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SC35 | NP_001188794.1 | RRM | <24..>100 | CDD:223796 | 38/75 (51%) |
RRM_SRSF2_SRSF8 | 25..97 | CDD:240757 | 36/71 (51%) | ||
SRSF12 | NP_542781.3 | RRM_SRSF10_SRSF12 | 10..93 | CDD:240758 | 40/82 (49%) |
PABP-1234 | <12..211 | CDD:130689 | 75/194 (39%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 86..261 | 38/120 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1533297at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |