DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and Hrb27C

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_321133.5 Gene:Hrb27C / 1281194 VectorBaseID:AGAMI1_011503 Length:412 Species:Anopheles gambiae


Alignment Length:98 Identity:35/98 - (35%)
Similarity:49/98 - (50%) Gaps:15/98 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE----AMD 85
            |.|..|::.|:.|:|:|.|.|.|||.|..:.::..|..||||.||.|.|..:.|.|||    .:|
Mosquito    20 LFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALENGPHTLD 84

  Fly    86 GRMLDGRELRVQMARYGRPSSPTRSSSGRRGGG 118
            ||.:|           .:|.:|......:|.||
Mosquito    85 GRTID-----------PKPCNPRSQHKPKRTGG 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 30/75 (40%)
Hrb27CXP_321133.5 RRM1_hnRNPA_hnRNPD_like 20..91 CDD:409763 30/81 (37%)
RRM_SF 106..185 CDD:473069 1/1 (100%)

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