DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and LOC1280439

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_320292.4 Gene:LOC1280439 / 1280439 VectorBaseID:AGAMI1_000289 Length:209 Species:Anopheles gambiae


Alignment Length:166 Identity:46/166 - (27%)
Similarity:73/166 - (43%) Gaps:14/166 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RPPPRIDG--MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRD 76
            ||..::.|  :.::.:..|.:..|.|.||..|...|.:....:..|..|...||:||:.:..:.:
Mosquito    50 RPNRKVKGNPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYSARGE 114

  Fly    77 AEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSR- 140
            |..|:|.|.|..:||:|:.|.       ....|...|.:....|||.|||::|:.   :|...: 
Mosquito   115 ALRAIERMHGVTIDGKEILVD-------EEWERRLEGWKPRRLGGGFGGRKKSQQ---LRFGCKV 169

  Fly   141 SPRRRSYSRSRSPGSHSP-ERRSKFSRSPVRGDSRN 175
            .|.||....:....|.|. .||.:..:....|.|||
Mosquito   170 QPFRRPILETGGVASVSEWNRRVRQRKEGPTGSSRN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 21/71 (30%)
LOC1280439XP_320292.4 None

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