DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and Rsf1

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_061509636.1 Gene:Rsf1 / 1280099 VectorBaseID:AGAMI1_014631 Length:224 Species:Anopheles gambiae


Alignment Length:177 Identity:60/177 - (33%)
Similarity:81/177 - (45%) Gaps:20/177 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.|||.:...|||...|.:.|::..:::     .....||||:.|.:|.:||.|.:.::|:.:.|
Mosquito    11 VGNLTDKVKKEDLEGEFTKYGKLNSVWV-----AFNPPGFAFIEFENKEEAETACDNLNGQDILG 70

  Fly    92 RELRVQMARYGR-----PSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRR----RSY 147
            .:|||:::: ||     .|...|...||.||.|||..||   |...|..|..||...|    .||
Mosquito    71 SKLRVEISK-GRRNPRGASRGFRGPPGRNGGSGGGSIGG---SGGGSSFRNGSRGGFRDGGGSSY 131

  Fly   148 SRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSR 194
            ....|.|..|..|..  |||..|.|...|...|.||.:...||...|
Mosquito   132 RSGSSGGGGSSFRGG--SRSSGRFDGGYGSSGGGGGRSSGYSRDGGR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 22/69 (32%)
Rsf1XP_061509636.1 None

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