Protein Alignment SC35 and Cirbp

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001366350.1
• Gene: Cirbp / 12696
• MGIID: 893588
• Length: 176
• Species: Mus musculus
• Alignment Length: 159
• Identity: 61/159 - (38%)
• Similarity: 83/159 - (52%)
• Gaps: 18/159 - (11%)

  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.|..|::.|..:.|.:||.:.|::.::.:.:||.|:.||||.||.|.:..||:||:.||:|:.:
Mouse     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72

  Fly    90 DGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRSRSPG 154
            |||::||..|  |: ||..||...|  ||..||.|..|..|||.  |..||....|.|...|..
Mouse    73 DGRQIRVDQA--GK-SSDNRSRGYR--GGSAGGRGFFRGGRSRG--RGFSRGGGDRGYGGGRFE- 129

  Fly   155 SHSPERRSKFSRSPVRGDSRNGIGSGSGG 183
                      |||...|.||:...|.|.|
Mouse   130 ----------SRSGGYGGSRDYYASRSQG 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	30/74 (41%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	29/71 (41%)
Cirbp	NP_001366350.1	RRM_CIRBP_RBM3	6..85	CDD:409883	32/79 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0.928771	Normalized mean entropy	S1239
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.860