Protein Alignment SC35 and Rbm3

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_446148.1
• Gene: Rbm3 / 114488
• RGDID: 620145
• Length: 156
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 54/167 - (32%)
• Similarity: 73/167 - (43%)
• Gaps: 34/167 - (20%)

  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.|..|.:.|..:.|...|...|.:.::.:.:||.|:.||||.|:.|.:...|.||:.||:|..|
  Rat     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72

  Fly    90 DGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRS-------- 146
            |||::||..|  |:.:..||        ||..|:.||.||.||....:...|.|..|
  Rat    73 DGRQIRVDHA--GKSARGTR--------GGAFGAHGRGRSYSRGGGDQGYGSGRYDSRPGGYGYG 127

  Fly   147 YSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGG 183
            |.|||.                ..|.|:.|....|||
  Rat   128 YGRSRD----------------YSGRSQGGYDRYSGG 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	27/71 (38%)
Rbm3	NP_446148.1	RRM_CIRBP_RBM3	6..85	CDD:409883	30/78 (38%)