DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and SRSF9

DIOPT Version :9

Sequence 1:NP_001247139.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_003760.1 Gene:SRSF9 / 8683 HGNCID:10791 Length:221 Species:Homo sapiens


Alignment Length:244 Identity:130/244 - (53%)
Similarity:160/244 - (65%) Gaps:36/244 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRG-PPFAFVEFEDARDADDAVKARD 65
            |...:.||||||||.|:|.||::|||:|:|::..::||||.| .|||||.|||.|||:||:..|:
Human     9 GGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRN 73

  Fly    66 GYDYDGYRLRVEFPRG-GGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQ 129
            ||||...||||||||. ||.|.:..|.||             |||.:||.:||:|:|||.|||||
Human    74 GYDYGQCRLRVEFPRTYGGRGGWPRGGRN-------------GPPTRRSDFRVLVSGLPPSGSWQ 125

  Fly   130 DLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDND 194
            |||||||||||||:||..|||.|:||:||.|||:||::||||::|||||||.:||||..     :
Human   126 DLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP-----E 185

  Fly   195 RGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTY-SPVR 242
            |....|.|               |.||.||...|..:.||:|.| ||.|
Human   186 RSTSYGYS---------------RSRSGSRGRDSPYQSRGSPHYFSPFR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_001247139.1 RRM_SF 3..80 CDD:418427 46/77 (60%)
RRM2_SRSF1_like 115..188 CDD:410013 54/72 (75%)
SRSF9NP_003760.1 RRM1_SRSF9 15..86 CDD:241042 44/70 (63%)
RRM2_SRSF9 104..186 CDD:410161 58/86 (67%)
Interaction with SAFB1 188..200 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..221 15/46 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6370
eggNOG 1 0.900 - - E1_COG0724
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D523875at33208
OrthoFinder 1 1.000 - - FOG0000217
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102665
Panther 1 1.100 - - O PTHR23147
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1390
SonicParanoid 1 1.000 - - X1030
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.810

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