DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and NGR1

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_009771.3 Gene:NGR1 / 852513 SGDID:S000000416 Length:672 Species:Saccharomyces cerevisiae


Alignment Length:116 Identity:29/116 - (25%)
Similarity:44/116 - (37%) Gaps:25/116 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
            ::||.|.|......::.||..||.:..|.:.|  |....||:||...||:.:::...|:...|..
Yeast   362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIPN--GKNCGFVKFEKRIDAEASIQGLQGFIVGGSP 424

  Fly    74 LRVEFPRGG-----------GPGSYRGGNRNDRSRDGGGRMGGRGPPAKRS 113
            :|:.:.|..           |...|...|            |.|.|.|..|
Yeast   425 IRLSWGRPSSSNAKTNSTIMGASQYMSSN------------GLRAPSAASS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 20/70 (29%)
RRM2_SRSF1_like 115..188 CDD:410013
NGR1NP_009771.3 RRM1_NGR1_NAM8_like 35..180 CDD:410023
RRM2_NGR1_NAM8_like 191..270 CDD:410025
RRM3_NGR1_NAM8_like 359..430 CDD:409782 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.

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