DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and NOP6

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_010068.1 Gene:NOP6 / 851313 SGDID:S000002372 Length:225 Species:Saccharomyces cerevisiae


Alignment Length:207 Identity:39/207 - (18%)
Similarity:68/207 - (32%) Gaps:91/207 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYRGGN----- 91
            |:|...||.::     |.:.::.:|.:..||            :.:.|.|..|.|..|.:     
Yeast     8 KLTKKQLKAQQ-----FRKSKEEKDQEKDVK------------KEQAPEGKRPNSAAGNDGEEPV 55

  Fly    92 ----RNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSG 152
                :..|.|.|.|:.|.:|     :::.|.|..||...:..:|::|.:.:..            
Yeast    56 KKKRKTRRGRGGKGKNGKKG-----NRFIVFVGSLPRDITAVELQNHFKNSSP------------ 103

  Fly   153 VVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGG-------------------- 197
                             |..|.|:.:| :|::   |...|.||.|                    
Yeast   104 -----------------DQIRLRADKG-IAFL---EFDADKDRTGIQRRMDIALLQHGTLLKEKK 147

  Fly   198 -------GGGGS 202
                   ||||:
Yeast   148 INVELTVGGGGN 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 8/47 (17%)
RRM2_SRSF1_like 115..188 CDD:410013 11/72 (15%)
NOP6NP_010068.1 NatA_aux_su <1..55 CDD:463630 13/63 (21%)
RRM_Nop6 78..151 CDD:409834 16/105 (15%)

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