Protein Alignment SF2 and RNP1

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_013054.1
• Gene: RNP1 / 850680
• SGDID: S000003969
• Length: 249
• Species: Saccharomyces cerevisiae
• Alignment Length: 218
• Identity: 48/218 - (22%)
• Similarity: 90/218 - (41%)
• Gaps: 40/218 - (18%)

  Fly     9 IYVGNLPPDIRTKDIQDLFH-KFGKVTFVDLKNR--RGP--PFAFVEFEDARDADDAVKARDGYD 68
            :||||||.:.|.:|::|||. .:||:|...||.:  :.|  .|||:||::..:.....:..:|..
Yeast    37 LYVGNLPKNCRKQDLRDLFEPNYGKITINMLKKKPLKKPLKRFAFIEFQEGVNLKKVKEKMNGKI 101

  Fly    69 YDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAK-RSQYRVMVTGLPASGSWQDLK 132
            :...::.:|........|:....::::.         ..|..| .|...:.|..:|...:.:||.
Yeast   102 FMNEKIVIENILTKEEKSFEKNQKSNKK---------TAPDLKPLSTNTLYVKNIPMKSTNEDLA 157

  Fly   133 DHM-----------REAGD-----VCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFR-SHEGE 180
            ...           ||..|     |.|:|.:..|...::|..........||..:.:.| :..|.
Yeast   158 KIFGVDPKNINFVRRELVDLRTNKVFFSDEFHTGEAFIKFDNLGTGDSIQKKCREFKGRKASNGR 222

  Fly   181 VAYIRV--------REDSGDNDR 195
            |..:::        :::.|||.:
Yeast   223 VLLVKIASAKKNEQKQEGGDNTK 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	24/75 (32%)
		RRM2_SRSF1_like	115..188	CDD:410013	17/97 (18%)
RNP1	NP_013054.1	RRM	36..109	CDD:214636	23/71 (32%)
		PABP-1234	<37..>238	CDD:130689	45/209 (22%)