Protein Alignment SF2 and SR34

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_850933.1
• Gene: SR34 / 839262
• AraportID: AT1G02840
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 283
• Identity: 136/283 - (48%)
• Similarity: 173/283 - (61%)
• Gaps: 42/283 - (14%)

  Fly     1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKAR 64
            |.||:...:||||||.|||.::::|||.|:|.|..:|||....|| :|||||:|||||:||:..|
plant     1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65

  Fly    65 DGYDYDGYRLRVEFPRGG------GPGSYRGGNRNDRSRDGGGRMGGRGP-----PAKRSQYRVM 118
            ||||:||:|||||...||      ..||:.||.|      ||||  |||.     |::||::||:
plant    66 DGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGR------GGGR--GRGDGGSRGPSRRSEFRVL 122

  Fly   119 VTGLPASGSWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAIKKLDDSRFRSHEGE 180
            |||||:|.||||||||||:.|||||:..|:|.   :|||::..:||||||:|||||:.||:....
plant   123 VTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSN 187

  Fly   181 VAYIRVRE-----DSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRG------ 234
             .|:||||     ||....||.....|.....|.....||. |.||||||..::..||.
plant   188 -GYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRS-RSRSRSRSPKAKSSRRSPAKSTS 250

  Fly   235 ------TPTYSPVRRQSYSRSRS 251
                  :.:.||..|:|.|||||
plant   251 RSPGPRSKSRSPSPRRSRSRSRS 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	46/77 (60%)
		RRM2_SRSF1_like	115..188	CDD:410013	44/75 (59%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:410011	43/70 (61%)
		RRM2_SF2_plant_like	119..194	CDD:410014	44/75 (59%)