Protein Alignment SF2 and SR30

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_172386.3
• Gene: SR30 / 837433
• AraportID: AT1G09140
• Length: 268
• Species: Arabidopsis thaliana
• Alignment Length: 284
• Identity: 134/284 - (47%)
• Similarity: 163/284 - (57%)
• Gaps: 55/284 - (19%)

  Fly     1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKAR 64
            |.||....|||||||.|||..:::|||:|:|.:..:|||....|| :|||||||.||||||:..|
plant     1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGR 65

  Fly    65 DGYDYDGYRLRVEFPRGG---GPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASG 126
            ||||:||.|||||...||   .|...|..:....||          .|::||.|||:|||||.|.
plant    66 DGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASR----------APSRRSDYRVLVTGLPPSA 120

  Fly   127 SWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
            ||||||||||:||||||::.:.|.   ||||::..::||||||:|||.:.||:.... |||||||
plant   121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS-AYIRVRE 184

  Fly   189 -DSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSR----SFS---------------SRPRRR 233
             :|....|              ....|:.||.|||||    |:|               |||..|
plant   185 YESRSVSR--------------SPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPLSR 235

  Fly   234 GTPTYSPVRR---QSYSRSRSRSN 254
            ....||.|.|   :|.||||||||
plant   236 SRSLYSSVSRSQSRSKSRSRSRSN 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	47/77 (61%)
		RRM2_SRSF1_like	115..188	CDD:410013	46/75 (61%)
SR30	NP_172386.3	RRM	<1..165	CDD:223796	93/173 (54%)
		RRM1_SF2_plant_like	8..79	CDD:241043	44/70 (63%)
		RRM2_SF2_plant_like	109..184	CDD:241046	46/75 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	92	1.000	Domainoid score	I2579
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	226	1.000	Inparanoid score	I1165
OMA	1	1.010	-	-		QHG54399
OrthoDB	1	1.010	-	-		D1321443at2759
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	1	1.000	-	-		otm2461
orthoMCL	1	0.900	-	-		OOG6_102665
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1030
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840