Protein Alignment SF2 and RS41

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_200017.2
• Gene: RS41 / 835279
• AraportID: AT5G52040
• Length: 357
• Species: Arabidopsis thaliana
• Alignment Length: 266
• Identity: 81/266 - (30%)
• Similarity: 111/266 - (41%)
• Gaps: 65/266 - (24%)

  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDY--DG 71
            ::.||...|.|..|::.||.|:|||..||:|    ..||||..||.|||:||::|.|.::|  .|
plant     4 VFCGNFEYDARESDLERLFRKYGKVERVDMK----AGFAFVYMEDERDAEDAIRALDRFEYGRTG 64

  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGG--RGPPAKRSQYRVMVTGLPASGS-WQDLKD 133
            .|||||:            .:|||.  |.||.||  |.....|....:.|....|..: .:||:.
plant    65 RRLRVEW------------TKNDRG--GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLER 115

  Fly   134 HMREAGDVC-------FADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSG 191
            |....|.:.       ||        .:::...||...|:...:.|:.......|.|....:||.
plant   116 HFEPYGKIVNVRIRRNFA--------FIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSR 172

  Fly   192 DNDRGGGGGGSGGGGGGSGGGGSRDYRDRS---RSRSFSSRPRRRGTPTY----SPVRRQSYSRS 249
            .|                 |......||||   |.||.|...|.||:|.|    |||   ::.|.
plant   173 GN-----------------GYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV---AHKRE 217

  Fly   250 RSRSNY 255
            |:..:|
plant   218 RTSPDY 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	34/72 (47%)
		RRM2_SRSF1_like	115..188	CDD:410013	14/80 (18%)
RS41	NP_200017.2	RRM1_AtRSp31_like	2..73	CDD:409680	34/84 (40%)
		RRM2_AtRSp31_like	97..166	CDD:409899	14/76 (18%)