Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112539.2 | Gene: | Cstf2t / 83410 | MGIID: | 1932622 | Length: | 632 | Species: | Mus musculus |
Alignment Length: | 237 | Identity: | 53/237 - (22%) |
---|---|---|---|
Similarity: | 92/237 - (38%) | Gaps: | 56/237 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRR--GPP--FAFVEFEDARDADDAVKARDGYDY 69
Fly 70 DGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGP--PAKRSQY-------------RVMV 119
Fly 120 TGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAY- 183
Fly 184 -----IRV--------REDSGDNDRGGGGGGSGGGGGGSGGG 212 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 22/74 (30%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 15/99 (15%) | ||
Cstf2t | NP_112539.2 | RRM | <16..>109 | CDD:223796 | 26/105 (25%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 22/88 (25%) | ||
CSTF2_hinge | 113..191 | CDD:291025 | 14/85 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 201..296 | 10/31 (32%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 365..433 | ||||
8 X 5 AA tandem repeats of M-E-T-R-[AG] | 428..466 | ||||
12 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q | 508..565 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 519..590 | ||||
CSTF_C | 588..628 | CDD:291002 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |