Protein Alignment SF2 and AT4G36960

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_568011.1
• Gene: AT4G36960 / 829850
• AraportID: AT4G36960
• Length: 379
• Species: Arabidopsis thaliana
• Alignment Length: 305
• Identity: 75/305 - (24%)
• Similarity: 102/305 - (33%)
• Gaps: 94/305 - (30%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDL--------KNRRGPPFAFVEFEDARDADDAVKAR 64
            ||:|..:|..:...|.:..|.::|::|  ||        |..||  ..|:.|..|...:|.::
plant    92 RIFVARIPSSVSESDFRSHFERYGEIT--DLYMPKDYNSKQHRG--IGFITFSSADSVEDLME-- 150

  Fly    65 DGYDYDGYRLRVEF---------PRG-----------------GGPGSYRGGNRNDRSRDGGGRM 103
            |.:|..|..:.|:.         ||.                 |.||.|...:....:......:
plant   151 DTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAAL 215

  Fly   104 G------------GRGPPAKRS-QYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKD------ 149
            |            |||.|..|. ..::.|..||...|..||:|:....|.:..|...||
plant   216 GAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGH 280

  Fly   150 -GSGVVEFLRHEDMKYAIKKLDDSRFRSHE---GEVAYIRVREDSGD--NDRGGGGGGSG----- 203
             |.|.|.|..:       ...|....||||   .|||.     ||..  ::.|...|.|.
plant   281 RGFGFVTFAEN-------GVADRVARRSHEICGQEVAI-----DSATPLDEAGPSAGASSMLSSS 333

  Fly   204 -----GGGGG-------SGGGGSRDYRDRSRSRSFSSRPRRRGTP 236
                 ||.||       ..||.|.|........:..|||.||..|
plant   334 RPEYFGGYGGPMRAFGRMYGGMSLDDWGYGMPNARPSRPDRRYRP 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	21/88 (24%)
		RRM2_SRSF1_like	115..188	CDD:410013	23/82 (28%)
AT4G36960	NP_568011.1	RRM_SF	4..77	CDD:473069
		PABP-1234	5..>378	CDD:130689	74/303 (24%)
		RRM_SF	91..166	CDD:473069	21/79 (27%)