Protein Alignment SF2 and RS40

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001190837.1
• Gene: RS40 / 828654
• AraportID: AT4G25500
• Length: 350
• Species: Arabidopsis thaliana
• Alignment Length: 271
• Identity: 87/271 - (32%)
• Similarity: 119/271 - (43%)
• Gaps: 64/271 - (23%)

  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDY--DG 71
            ::.||...|.|..|::.||.|:|||..||:|    ..||||..||.|||:||::|.|.:::  .|
plant     4 VFCGNFEYDAREGDLERLFRKYGKVERVDMK----AGFAFVYMEDERDAEDAIRALDRFEFGRKG 64

  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGS-WQDLKDHM 135
            .|||||:.:     |.|||::    |.|||  ..|...:.|....:.|....|..: .:||:.|.
plant    65 RRLRVEWTK-----SERGGDK----RSGGG--SRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 118

  Fly   136 REAGDVC-------FADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDN 193
            ...|.:.       ||           |:::|..:.|.:.||.|.......:|  |.|.....|:
plant   119 EPYGKIVNVRIRRNFA-----------FIQYEAQEDATRALDASNNSKLMDKV--ISVEYAVKDD 170

  Fly   194 DRGGGGGGSGGGGGGSGGGGSRDYRDRS---RSRSFSSRPRRRGTPTY----SPV---RRQ---- 244
            |..|            .|......||||   |.||.|...|.||:|.|    |||   |::
plant   171 DARG------------NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSP 223

  Fly   245 SYSRSRSRSNY 255
            .|.|.||.|.|
plant   224 DYGRRRSPSPY 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	33/72 (46%)
		RRM2_SRSF1_like	115..188	CDD:410013	17/80 (21%)
RS40	NP_001190837.1	RRM1_AtRSp31_like	2..73	CDD:240680	33/72 (46%)
		RRM_SF	98..167	CDD:388407	17/81 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810