Protein Alignment SF2 and SR34a

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_190512.3
• Gene: SR34a / 824105
• AraportID: AT3G49430
• Length: 300
• Species: Arabidopsis thaliana
• Alignment Length: 288
• Identity: 128/288 - (44%)
• Similarity: 165/288 - (57%)
• Gaps: 36/288 - (12%)

  Fly     1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKAR 64
            |..|....|||||||.|||..:|:|:|:|:|::..::||....|| :.|||||.:|||:||:|.|
plant     1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGR 65

  Fly    65 DGYDYDGYRLRVEFPRGG-GPGS--YRGGNRNDRSRDGGGRMGG---RGPPAKRSQYRVMVTGLP 123
            |||:.||.|||||...|| |..|  .|||.....|..|||..||   |...::.|::||:|.|||
plant    66 DGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLP 130

  Fly   124 ASGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIR 185
            :|.||||||||||:|||||||:..:|..   |||::..::||||||:||||:.||:.... .:||
plant   131 SSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWAR-GFIR 194

  Fly   186 VR--EDSGDNDRGGGGGGSGGGGGGSGGGGSRDY-RDRSRSRSFSSR------PRR--------- 232
            |:  |.|....|......|.........|..|.: |.||.|||.|.|      |||
plant   195 VKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKS 259

  Fly   233 -------RGTPTYSPVRRQSYSRSRSRS 253
                   :.:|..:..|.:|.|||||||
plant   260 RSPSPDKKKSPPRAMSRSKSRSRSRSRS 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	42/77 (55%)
		RRM2_SRSF1_like	115..188	CDD:410013	43/77 (56%)
SR34a	NP_190512.3	RRM_SF	9..79	CDD:473069	40/69 (58%)
		RRM2_SF2_plant_like	122..197	CDD:410014	43/75 (57%)