Protein Alignment SF2 and AT2G35410

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_181084.1
• Gene: AT2G35410 / 818107
• AraportID: AT2G35410
• Length: 308
• Species: Arabidopsis thaliana
• Alignment Length: 220
• Identity: 54/220 - (24%)
• Similarity: 84/220 - (38%)
• Gaps: 44/220 - (20%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDL---KNRRGPPFAFVEFEDARDADDAVKARDGYDY 69
            :::|.|||..:...||.:||.:.|.|..|::   |:.:...||||......:|..|:...|.:..
plant    96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQV 160

  Fly    70 DGYRLRVEF------PRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSW 128
            .|..:.|.|      |....|        ||..          .|....:::::.|:.|    :|
plant   161 SGRIISVSFARRFKKPTPKSP--------NDLP----------SPAPGDTRHKLYVSNL----AW 203

  Fly   129 QDLKDHMRE---AGD-------VCFADT--YKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEV 181
            :....|:||   |.|       |.|||.  ...|.|.|.|...|:.:.||.||:..........:
plant   204 KARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPITL 268

  Fly   182 AY-IRVREDSGDNDRGGGGGGSGGG 205
            .: :|...:|.|.|.......|..|
plant   269 KFSLRSASESEDGDSVEANNASEDG 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	22/80 (28%)
		RRM2_SRSF1_like	115..188	CDD:410013	22/85 (26%)
AT2G35410	NP_181084.1	RRM	96..171	CDD:440488	22/74 (30%)
		PABP-1234	97..>279	CDD:130689	49/203 (24%)