Protein Alignment SF2 and tia1

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_997793.1
• Gene: tia1 / 793165
• ZFINID: ZDB-GENE-030131-1506
• Length: 386
• Species: Danio rerio
• Alignment Length: 203
• Identity: 41/203 - (20%)
• Similarity: 72/203 - (35%)
• Gaps: 59/203 - (29%)

  Fly     5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVT----FVDLKNRRGPPFAFVEFEDARDADDAVKARD 65
            |...::||:|.|:|.|.||:..|..||:::    ..|:...:...:.||.|.:..||::|::...
Zfish    94 NHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMG 158

  Fly    66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRV------------- 117
            |....|.::|..:                         ..|.|||.::.|..
Zfish   159 GQWLGGRQIRTNW-------------------------ATRKPPAPKATYETNTKHLSFDEVVNQ 198

  Fly   118 ------------MVTGLPASGSWQDLKDHMREAGDVCFADTYKD-GSGVVEFLRHEDMKYAIKKL 169
                        :.|||    :.|.::......|.:.....:.| |...|.|..||...:||..:
Zfish   199 SSPSNCTVYCGGVTTGL----TEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSV 259

  Fly   170 DDSRFRSH 177
            :.:....|
Zfish   260 NGTSLEGH 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	22/78 (28%)
		RRM2_SRSF1_like	115..188	CDD:410013	15/89 (17%)
tia1	NP_997793.1	ELAV_HUD_SF	6..270	CDD:273741	41/203 (20%)
		RRM1_TIA1	9..82	CDD:241059
		RRM2_TIA1	95..174	CDD:241062	21/103 (20%)
		RRM3_TIA1	204..277	CDD:241065	14/68 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900