Protein Alignment SF2 and ncl

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001070120.3
• Gene: ncl / 767714
• ZFINID: ZDB-GENE-030131-6986
• Length: 704
• Species: Danio rerio
• Alignment Length: 218
• Identity: 65/218 - (29%)
• Similarity: 96/218 - (44%)
• Gaps: 37/218 - (16%)

  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
            :.|.||........:|.:|.|...:. :...|.|...:||||||:..|:.:|::..:..|.:|..
Zfish   466 LVVNNLAFSASEDSLQSVFEKAVSIR-IPQNNGRPKGYAFVEFENVEDSKEALENCNNTDIEGRS 529

  Fly    74 LRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHM--- 135
            :|:|:            ::|||.|.||||  |...|.|    .:.|.||....:.|.|||..
Zfish   530 IRLEY------------SQNDRERGGGGR--GNSGPTK----TLFVKGLSDDTTDQTLKDSFDGA 576

  Fly   136 --------REAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGD 192
                    |:.|.       ..|.|.|:|...:|.|.|.:.:||.....::..:.|.:.:.:.|.
Zfish   577 IAARIATDRDTGS-------SKGFGFVDFDNEQDCKAAKEAMDDGEIDGNKVTLDYAKPKGEGGR 634

  Fly   193 NDRGGGGGGSGGGGGGSGGGGSR 215
            ...|||.||.||.|||.||.|.|
Zfish   635 GGFGGGRGGFGGRGGGRGGFGGR 657

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	20/70 (29%)
		RRM2_SRSF1_like	115..188	CDD:410013	19/83 (23%)
ncl	NP_001070120.3	None