Protein Alignment SF2 and cirbpb

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001035411.2
• Gene: cirbpb / 678563
• ZFINID: ZDB-GENE-030131-5841
• Length: 206
• Species: Danio rerio
• Alignment Length: 237
• Identity: 72/237 - (30%)
• Similarity: 96/237 - (40%)
• Gaps: 68/237 - (28%)

  Fly     5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVD-LKNR---RGPPFAFVEFEDARDADDAVKARD 65
            :|.::::|.|..|...:.:::.|.|:|.:..|| :::|   |...|.||.||:..||.||:.|.:
Zfish     3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMN 67

  Fly    66 GYDYDGYRLRVE--FPRGGGPGSYRGGN--------RNDRSRDGGGRMGGRGPPAKRSQYRVMVT 120
            |...||..:||:  ...||..|.:|||:        |..|.|.|||..|.|...:.||
Zfish    68 GKQVDGRMIRVDEAGKSGGRSGGFRGGSRGGGRGFFRGSRGRGGGGYGGDRSYGSDRS------- 125

  Fly   121 GLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIR 185
                            ..||..:......|.|        |..|.            .||.:|
Zfish   126 ----------------FGGDRSYGGDRSYGGG--------DRGYG------------GGERSY-- 152

  Fly   186 VREDSGDNDRGGGGGG-SGGGGGGSGGGGSRDYR-----DRS 221
               ..||...|||||| |...||.|.|||.||.|     |||
Zfish   153 ---GGGDRSYGGGGGGYSNRSGGYSSGGGYRDNRNQGGYDRS 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	26/80 (33%)
		RRM2_SRSF1_like	115..188	CDD:410013	9/72 (13%)
cirbpb	NP_001035411.2	RRM_CIRBP_RBM3	5..83	CDD:409883	25/77 (32%)