Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003080.2 | Gene: | SNRNP70 / 6625 | HGNCID: | 11150 | Length: | 437 | Species: | Homo sapiens |
Alignment Length: | 303 | Identity: | 74/303 - (24%) |
---|---|---|---|
Similarity: | 97/303 - (32%) | Gaps: | 92/303 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDL--KNRRGPP--FAFVEFEDARDADDAVKARDGYDY 69
Fly 70 DGYRLRVEFPR------------GGG-PGSYRGG---NRNDRSRDGGGRMGGRGPPAKRSQYRVM 118
Fly 119 VTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAY 183
Fly 184 IRVREDSGDND------------------------RGGGG--------------GGSGGGGGGSG 210
Fly 211 GGGSRDY-RDRSRSRSFSSRPRRRGTPTYSPVRRQSYSRSRSR 252 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 21/74 (28%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 11/72 (15%) | ||
SNRNP70 | NP_003080.2 | U1snRNP70_N | 3..93 | CDD:403437 | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 48..79 | ||||
Required for interaction with U1 RNA. /evidence=ECO:0000269|PubMed:2467746 | 92..202 | 26/96 (27%) | |||
RRM_snRNP70 | 102..187 | CDD:409682 | 22/81 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 187..437 | 52/221 (24%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |