DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and SRSF5

DIOPT Version :9

Sequence 1:NP_001247139.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001034554.1 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens


Alignment Length:252 Identity:99/252 - (39%)
Similarity:131/252 - (51%) Gaps:33/252 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71
            ||:::|.|.|..|.||::..|..:|::..:|||  ||  |.||||||.|||||||...||.:...
Human     4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCS 64

  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMR 136
            .|:.:|..|....|....|..:||......|...|..|..|::.|::|..|.:..|||||||.||
Human    65 ERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMR 129

  Fly   137 EAGDVCFADTY--KDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGG 199
            :||:|.|||.:  |...|||||..:.|:|.||:||........:     |::.|.|..:.|    
Human   130 QAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRK-----IKLIEGSKRHSR---- 185

  Fly   200 GGSGGGGGGSGGGGSRDYRDRSRSRSFS---SRPRRRGTPTYSPVRRQSYSRSRSRS 253
                          ||. |.|||:||.|   ||.|.|...:||..|.:|.|||||:|
Human   186 --------------SRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_001247139.1 RRM_SF 3..80 CDD:418427 33/72 (46%)
RRM2_SRSF1_like 115..188 CDD:410013 31/74 (42%)
SRSF5NP_001034554.1 RRM1_SRSF5 5..74 CDD:410008 32/72 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 8/31 (26%)
RRM2_SRSF5 99..179 CDD:410158 34/84 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272 27/73 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000217
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1390
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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