DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and SRSF4

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_005617.2 Gene:SRSF4 / 6429 HGNCID:10786 Length:494 Species:Homo sapiens


Alignment Length:276 Identity:109/276 - (39%)
Similarity:140/276 - (50%) Gaps:49/276 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|....|.:|::..|..:||:..|||||..|    ||||:|.|||||||...:|.|..|.
Human     3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGE 63

  Fly    73 RLRVEFPRGGGP---GSYRGGNRNDRSRDG-GGRMGGR---GPPAKRSQYRVMVTGLPASGSWQD 130
            |:.||..|  ||   |||..|      |.| |.|..||   |||. |::||::|..|.:..||||
Human    64 RVIVEHAR--GPRRDGSYGSG------RSGYGYRRSGRDK
YGPPT-RTEYRLIVENLSSRCSWQD 119

  Fly   131 LKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIKKLDD---------------------- 171
            |||:||:||:|.:||.:|  ...||:||:.:.|||.|::|||.                      
Human   120 LKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRS 184

  Fly   172 -SRFRSHEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGT 235
             ||.|||....:  |.|.......|.|....|..........|||. |.:||||| .||.|.:..
Human   185 YSRSRSHSRSRS--RSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRS-RSKSRSRS-QSRSRSKKE 245

  Fly   236 PTYSPVRRQSYSRSRS 251
            .:.||.:.:|.|||.|
Human   246 KSRSPSKEKSRSRSHS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 33/71 (46%)
RRM2_SRSF1_like 115..188 CDD:410013 36/97 (37%)
SRSF4NP_005617.2 RRM1_SRSF4 1..87 CDD:410007 42/95 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95 12/28 (43%)
RRM2_SRSF4_like 104..175 CDD:410012 30/70 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..494 29/97 (30%)

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