Protein Alignment SF2 and CG34354

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 204
• Identity: 46/204 - (22%)
• Similarity: 83/204 - (40%)
• Gaps: 19/204 - (9%)

  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP------FAFVEFEDARDADDAVKARDGY 67
            |:||:|..:|.|:.::|.|..||:::  |.:..|.|.      :.||.|....:|:.|:.|.:|.
  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEIS--DCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQ 160

  Fly    68 DYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQD-- 130
            ......:|..:.....|.:....|....:.|   .:..:..|...:.|...:.| ..||...:
  Fly   161 WLGSRSIRTNWATRKPPATKADMNAKPLTFD---EVYNQSSPTNCTVYCGGING-ALSGFLNEEI 221

  Fly   131 LKDHMREAGDVCFADTYKD-GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGD-N 193
            |:......|.:.....:|| |...|.|...|...:||..::::.......:.|:   .::||| |
  Fly   222 LQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAW---GKESGDPN 283

  Fly   194 DRGGGGGGS 202
            ......||:
  Fly   284 HMSAIAGGA 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	21/76 (28%)
		RRM2_SRSF1_like	115..188	CDD:410013	15/75 (20%)
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	46/204 (23%)
		RRM2_TIA1_like	97..171	CDD:409789	21/74 (28%)
		RRM3_TIA1_like	202..276	CDD:409790	15/77 (19%)