DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and RBM23

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001339693.1 Gene:RBM23 / 55147 HGNCID:20155 Length:483 Species:Homo sapiens


Alignment Length:109 Identity:29/109 - (26%)
Similarity:51/109 - (46%) Gaps:8/109 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVK 62
            |:....|:|||:|..:|....::.:|..|||:..:    |....|...:.|:.|.|:..|..|::
Human   302 GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 366

  Fly    63 ARDGYDYDGYRLRV----EFPRGGGPGSYRGGNRNDRSRDGGGR 102
            ..:|::..|..:||    |...||...::..|::.......|||
Human   367 QLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQELDLGSAGGR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 22/84 (26%)
RRM2_SRSF1_like 115..188 CDD:410013
RBM23NP_001339693.1 SF-CC1 143..482 CDD:273721 29/109 (27%)
Blue background indicates that the domain is not in the aligned region.

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