Protein Alignment SF2 and SC35

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Alignment Length: 249
• Identity: 66/249 - (26%)
• Similarity: 82/249 - (32%)
• Gaps: 123/249 - (49%)

  Fly    11 VGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71
            |.||......:|::.:|.:.|:|..:    |...|....||||.|.|.|||:||::|.||...||
  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91

  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMR 136
            ..|||:..|.|.|.|        .:|...||.|
  Fly    92 RELRVQMARYGRPSS--------PTRSSSGRRG-------------------------------- 116

  Fly   137 EAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGGGG 201
                                                                             
  Fly   117 ----------------------------------------------------------------- 116

  Fly   202 SGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTYSPVRRQSYSRSRSRSNY 255
             |||||||||      |.||||||    |.||  .:.|| ||:|||||||..::
  Fly   117 -GGGGGGSGG------RRRSRSRS----PMRR--RSRSP-RRRSYSRSRSPGSH 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	28/72 (39%)
		RRM2_SRSF1_like	115..188	CDD:410013	0/72 (0%)
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	27/69 (39%)