Protein Alignment SF2 and srsf6b

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001008732.1
• Gene: srsf6b / 494133
• ZFINID: ZDB-GENE-041219-1
• Length: 355
• Species: Danio rerio
• Alignment Length: 290
• Identity: 109/290 - (37%)
• Similarity: 139/290 - (47%)
• Gaps: 55/290 - (18%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|...:|.||||..|..:||:...||||..|    ||||||.|||||||...:|.:..|.
Zfish     3 RVYIGKLSYHVREKDIQRFFGGYGKLMETDLKNGYG----FVEFEDTRDADDAVYELNGKELCGE 63

  Fly    73 RLRVEFPR---------GGGPGSYRGGNRN----DRSRDGGGRMGGRGPPAKRSQYRVMVTGLPA 124
            |:.||..|         |||.|.: ||..|    .|||.|..:.   |||. |::||::|..|.:
Zfish    64 RVIVEHARGPRRDRDGYGGGYGGF-GGRSNSGYSSRSRSGRDKY---GPPV-RTEYRLIVENLSS 123

  Fly   125 SGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLD----------------- 170
            ..|||||||.||:||:|.:||.:|:  ..||:||..|.||:.|:.|||
Zfish   124 RCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALDKLDVTDINGRKIRLVEDKPR 188

  Fly   171 ------DSRFRSHEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSR------S 223
                  .||.||.....:..|.|..|....|......|......|..|  |.||.|||      |
Zfish   189 RRRSYSASRSRSRSRRRSRSRSRRSSRSQSRSRSRSRSRSKHSRSRSG--RKYRSRSRSSRKSHS 251

  Fly   224 RSFSSRPRRRGTPTYSPVRRQSYSRSRSRS 253
            :|.|.:.|.|........|.:|.|||:::|
Zfish   252 KSHSKKSRSRSRSRTEKSRSRSRSRSKAKS 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	35/71 (49%)
		RRM2_SRSF1_like	115..188	CDD:410013	35/97 (36%)
srsf6b	NP_001008732.1	RRM1_SRSF6	3..72	CDD:241040	35/72 (49%)
		RRM	<3..>71	CDD:223796	35/71 (49%)
		RRM	<108..>187	CDD:223796	33/79 (42%)
		RRM2_SRSF4_like	114..185	CDD:241044	30/70 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.840