DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and srsf7

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001007487.1 Gene:srsf7 / 493215 XenbaseID:XB-GENE-920026 Length:234 Species:Xenopus tropicalis


Alignment Length:257 Identity:79/257 - (30%)
Similarity:102/257 - (39%) Gaps:78/257 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDY 69
            |.::|||||.......:::..|..:|.:..|.:  .|.|| ||||||||.|||:|||:..||...
 Frog    10 EAKVYVGNLGTGAGKGELERAFSYYGPLRTVWI--ARNPPGFAFVEFEDTRDAEDAVRGLDGKVI 72

  Fly    70 DGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDH 134
            .|.|:|||...|....|     |.||            |||:|.               .|..|.
 Frog    73 CGSRVRVELSTGMPRRS-----RYDR------------PPARRP---------------FDPSDR 105

  Fly   135 MREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGG 199
            ..|.|:          .|   ...::..:|:.::...:|.|||...    |.|..:....|    
 Frog   106 CYECGE----------KG---HYAYDCQRYSRRRRSRTRSRSHSRS----RGRRYTRSRSR---- 149

  Fly   200 GGSGGGGGGSGGGGSRDYRDRS----RSRSFSSRPRRRGTP----TYSPVRRQSYSRSRSRS 253
                          ||..|.||    ||||.|.|..|..||    :.|..|.:|.|||||||
 Frog   150 --------------SRGRRSRSASPRRSRSASPRRSRNATPRSSRSGSVKRSRSLSRSRSRS 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 33/74 (45%)
RRM2_SRSF1_like 115..188 CDD:410013 11/72 (15%)
srsf7NP_001007487.1 RRM_SF 12..88 CDD:473069 33/77 (43%)
zf-CCHC 104..119 CDD:395050 4/27 (15%)

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