Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001006919.1 | Gene: | srsf1 / 448766 | XenbaseID: | XB-GENE-486875 | Length: | 267 | Species: | Xenopus tropicalis |
Alignment Length: | 266 | Identity: | 161/266 - (60%) |
---|---|---|---|
Similarity: | 188/266 - (70%) | Gaps: | 29/266 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRR-GPPFAFVEFEDARDADDAVKARDGYD 68
Fly 69 YDGYRLRVEFPR--------------GGGPGSYRGGNRNDRSRDGGGRMGGR-GPPAKRSQYRVM 118
Fly 119 VTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAY 183
Fly 184 IRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRR-RGTPTYSPVRRQSYS 247
Fly 248 RSRSRS 253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 60/75 (80%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 55/72 (76%) | ||
srsf1 | NP_001006919.1 | RRM1_SRSF1 | 17..90 | CDD:241041 | 58/72 (81%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 90..137 | 15/46 (33%) | |||
RRM2_SRSF1_like | 140..212 | CDD:241045 | 54/71 (76%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 212..267 | 27/66 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 117 | 1.000 | Domainoid score | I5864 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31411 | |
Inparanoid | 1 | 1.050 | 297 | 1.000 | Inparanoid score | I2678 |
OMA | 1 | 1.010 | - | - | QHG54399 | |
OrthoDB | 1 | 1.010 | - | - | D1321443at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000217 | |
OrthoInspector | 1 | 1.000 | - | - | oto102324 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23147 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1390 |
SonicParanoid | 1 | 1.000 | - | - | X1030 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |