Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746174.1 | Gene: | srsf5a / 448104 | XenbaseID: | XB-GENE-5954653 | Length: | 297 | Species: | Xenopus tropicalis |
Alignment Length: | 262 | Identity: | 91/262 - (34%) |
---|---|---|---|
Similarity: | 129/262 - (49%) | Gaps: | 56/262 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71
Fly 72 YRLRVEFPR----------GGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASG 126
Fly 127 SWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRED 189
Fly 190 SGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFS---SRPRRRGTPTYSPVRRQSYSRSRS 251
Fly 252 RS 253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 28/72 (39%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 29/74 (39%) | ||
srsf5a | XP_031746174.1 | RRM1_SRSF4_like | 40..108 | CDD:409774 | 27/71 (38%) |
RRM2_SRSF4_like | 152..223 | CDD:410012 | 29/75 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000217 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1390 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |