Protein Alignment SF2 and srsf5b

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001002610.1
• Gene: srsf5b / 436883
• ZFINID: ZDB-GENE-040718-354
• Length: 285
• Species: Danio rerio
• Alignment Length: 283
• Identity: 108/283 - (38%)
• Similarity: 139/283 - (49%)
• Gaps: 54/283 - (19%)

  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71
            |||::|.|.|..|.||::..|..:|::..:|||  ||  |.||||:|.|||:|||...||.:...
Zfish     4 CRIFIGRLNPSAREKDVERFFKGYGRIRDIDLK--RG--FGFVEFDDPRDAEDAVYELDGKELCN 64

  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMG---GRG-------PPAKRSQYRVMVTGLPASG 126
            .|:.:|..|    ...|||    |.|.||||..   |||       ||..|::.|::|..|.:..
Zfish    65 ERVTIEHAR----VRLRGG----RGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSRV 121

  Fly   127 SWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKL-------------DDSRFRS 176
            |||||||.||:||:|.|||.::.  ..|||||..|.|:|.|::||             :.||.:|
Zfish   122 SWQDLKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGKEINGRKIKLVEASRKKS 186

  Fly   177 HEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRR--------R 233
            ..      |.|.:|....|..|...|...............|.||||||.|:.|.|        .
Zfish   187 RS------RSRSNSSSRSRSRGRSASRSRSRSRSHSPKSHNRSRSRSRSASASPVRPKEAPRPES 245

  Fly   234 GTPTYS---PVRRQSYSRSRSRS 253
            .:|..|   |.|.:|.|||||||
Zfish   246 ASPPASAQHPPRSRSRSRSRSRS 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	32/72 (44%)
		RRM2_SRSF1_like	115..188	CDD:410013	33/87 (38%)
srsf5b	NP_001002610.1	RRM1_SRSF4_like	5..73	CDD:240783	31/71 (44%)
		RRM2_SRSF4_like	110..180	CDD:241044	29/69 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810