Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
Alignment Length: | 231 | Identity: | 74/231 - (32%) |
---|---|---|---|
Similarity: | 104/231 - (45%) | Gaps: | 54/231 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 DADDAVKARD------GYDYDGYRLRVEFPRGGGPGSYRGG-NRNDRSRDGGGRMGGRGPPAKRS 113
Fly 114 QYRVMVTGLPASGSWQDLKDHMRE-AGDVCFADTYKD------GSGVVEFLRHEDMKYAIKKLDD 171
Fly 172 SRFRSHEGEVAYIRVREDSGD---------NDRGGGGGGSG------GGGGGSGGGGSRDYRDRS 221
Fly 222 RSRSFSSR--PRRRGTPTYSPVRRQSYSRSRSRSNY 255 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 7/29 (24%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 23/79 (29%) | ||
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 61/187 (33%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 23/79 (29%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | |||
RRM | <543..>631 | CDD:223796 | |||
RRM_SF | 565..630 | CDD:302621 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |