Protein Alignment SF2 and srsf6a

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: XP_005161979.1
• Gene: srsf6a / 406775
• ZFINID: ZDB-GENE-040426-2824
• Length: 400
• Species: Danio rerio
• Alignment Length: 303
• Identity: 114/303 - (37%)
• Similarity: 147/303 - (48%)
• Gaps: 66/303 - (21%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|...:|.||||..|..:||:..|||||..|    ||||||.|||||||...:|.:..|.
Zfish     3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYG----FVEFEDTRDADDAVYELNGKELCGE 63

  Fly    73 RLRVEFPR------------------GGGPGSYRGGNRNDRSRDGGGRMGGR------------- 106
            |:.||..|                  |||.|.|.||........|||  |||
Zfish    64 RVMVEHARGPRRDRDSYGGGGGGGGGGGGGGGYYGGGGGGGGGGGGG--GGRSGYSSRSRTGRDK 126

  Fly   107 -GPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKK 168
             |||. |::||::|..|.:..|||||||.||:||:|.:||.:|:  ..||:||..:.||:.|::|
Zfish   127 YGPPV-RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRRALEK 190

  Fly   169 LDDS---------------RFRSHEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYR 218
            ||.:               |.||:.|..:..|.|..|  ..|......|...........||.:|
Zfish   191 LDGTDINGRKIRLVEDKPRRRRSYSGSRSRSRSRRRS--RSRSRRSSRSRSNSRSRSRSRSRRHR 253

  Fly   219 DRS----RSRSFSSRPRRRGTPTYSPVR---RQSYSRSRSRSN 254
            .||    ||||.|....|..:|: |..|   |:|:||||||::
Zfish   254 SRSRSGRRSRSKSGHKSRSKSPS-SKSRSRNRKSHSRSRSRTH 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	36/71 (51%)
		RRM2_SRSF1_like	115..188	CDD:410013	34/89 (38%)
srsf6a	XP_005161979.1	RRM	<3..137	CDD:223796	55/140 (39%)
		RRM_SF	3..72	CDD:302621	36/72 (50%)
		RRM2_SRSF4_like	135..206	CDD:241044	29/70 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910