Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005156854.1 | Gene: | tial1 / 394107 | ZFINID: | ZDB-GENE-040426-1547 | Length: | 399 | Species: | Danio rerio |
Alignment Length: | 209 | Identity: | 45/209 - (21%) |
---|---|---|---|
Similarity: | 75/209 - (35%) | Gaps: | 61/209 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVT----FVDLKNRRGPPFAFVEFED----------AR 55
Fly 56 DADDAVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRS------- 113
Fly 114 QYR---VMVTGLP------ASGSWQDLKDH-MREA----GDVCFADTYKD-GSGVVEFLRHEDMK 163
Fly 164 YAIKKLDDSRFRSH 177 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 23/88 (26%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 16/78 (21%) | ||
tial1 | XP_005156854.1 | RRM | 7..295 | CDD:223796 | 44/206 (21%) |
RRM_SF | 9..108 | CDD:302621 | |||
RRM2_TIAR | 114..203 | CDD:241061 | 22/113 (19%) | ||
RRM3_TIAR | 233..305 | CDD:241064 | 13/64 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |