Protein Alignment SF2 and Srsf4

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001102155.1
• Gene: Srsf4 / 362612
• RGDID: 1561347
• Length: 488
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 110/278 - (39%)
• Similarity: 141/278 - (50%)
• Gaps: 50/278 - (17%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|....|.:|::..|..:||:..|||||..|    ||||:|.|||||||...:|.|..|.
  Rat     3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGE 63

  Fly    73 RLRVEFPRGGGP---GSYRGGNRNDRSRDG-GGRMGGR---GPPAKRSQYRVMVTGLPASGSWQD 130
            |:.||..|  ||   |||..|      |.| |.|..||   |||. |::||::|..|.:..||||
  Rat    64 RVIVEHAR--GPRRDGSYGSG------RSGYGYRRSGRDKYGPPT-RTEYRLIVENLSSRCSWQD 119

  Fly   131 LKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIKKLDD---------------------- 171
            |||:||:||:|.:||.:|  ...||:||:.:.|||.|::|||.
  Rat   120 LKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRS 184

  Fly   172 -SRFRSHEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGT 235
             ||.|||....:  |.|.......|.|....|..........||.. |.:||||| .||.|.:..
  Rat   185 YSRSRSHSRSRS--RSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHS-RSKSRSRS-QSRSRSKKE 245

  Fly   236 PTYSPVRRQSYSRSRSRS 253
            .:.|| .:.:.|||||||
  Rat   246 KSRSP-SKDNKSRSRSRS 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	33/71 (46%)
		RRM2_SRSF1_like	115..188	CDD:410013	36/97 (37%)
Srsf4	NP_001102155.1	RRM1_SRSF4_like	3..72	CDD:240783	34/74 (46%)
		RRM2_SRSF4_like	104..175	CDD:241044	30/70 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810