Protein Alignment SF2 and Srsf6

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001014207.2
• Gene: Srsf6 / 362264
• RGDID: 1359241
• Length: 339
• Species: Rattus norvegicus
• Alignment Length: 286
• Identity: 110/286 - (38%)
• Similarity: 144/286 - (50%)
• Gaps: 57/286 - (19%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|..::|.||||..|..:|::..:||||..|    ||||||:|||||||...:..:..|.
  Rat     3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYG----FVEFEDSRDADDAVYELNSKELCGE 63

  Fly    73 RLRVEFPRGGGPGSYRGGNRNDR------SRDGGG-----RMGGR---GPPAKRSQYRVMVTGLP 123
            |:.||..|         |.|.||      ||.|||     |..||   |||. |::||::|..|.
  Rat    64 RVIVEHAR---------GPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPV-RTEYRLIVENLS 118

  Fly   124 ASGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRV 186
            :..|||||||.||:||:|.:||.:|:  ..||:||..:.|||.|:.|||.:......     ||:
  Rat   119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRN-----IRL 178

  Fly   187 RED----------SGDNDRGGGGGGSGGGGGGSGGGGSRDY-RDRSRSRSFS---SRPRRRGTPT 237
            .||          ||...|......|......|....||.. :.||||||.|   ||.|.:|..:
  Rat   179 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKS 243

  Fly   238 YSPVRRQ--------SYSRSRSRSNY 255
            .|..:.:        |:|||||:..|
  Rat   244 RSKSKSKPKSDRGSHSHSRSRSKDKY 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	33/71 (46%)
		RRM2_SRSF1_like	115..188	CDD:410013	32/74 (43%)
Srsf6	NP_001014207.2	RRM_SF	1..72	CDD:418427	34/81 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..103		10/27 (37%)
		RRM2_SRSF6	110..182	CDD:410159	33/76 (43%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	176..339		30/94 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810