Protein Alignment SF2 and Srsf3

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001041372.1
• Gene: Srsf3 / 361814
• RGDID: 1309233
• Length: 164
• Species: Rattus norvegicus
• Alignment Length: 250
• Identity: 72/250 - (28%)
• Similarity: 87/250 - (34%)
• Gaps: 98/250 - (39%)

  Fly     6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDY 69
            :|::|||||..:....:::..|..:|.:..|.:  .|.|| ||||||||.|||.|||:..||...
  Rat     9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWV--ARNPPGFAFVEFEDPRDAADAVRELDGRTL 71

  Fly    70 DGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDH 134
            .|.|:|||...|           ..|||:       ||||.                ||
  Rat    72 CGCRVRVELSNG-----------EKRSRN-------RGPPP----------------SW------ 96

  Fly   135 MREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGG 199
                                          ..:..||.|.||........|.|..|....|...
  Rat    97 ------------------------------GRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLS- 130

  Fly   200 GGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTYSPVRRQSYSRSRSRSN 254
                              |||.|.||.|   |.|   .:.|.|..|.||||||||
  Rat   131 ------------------RDRRRERSLS---RER---NHKPSRSFSRSRSRSRSN 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	33/74 (45%)
		RRM2_SRSF1_like	115..188	CDD:410013	8/72 (11%)
Srsf3	NP_001041372.1	RRM_SRSF3	6..86	CDD:241089	34/89 (38%)