Protein Alignment SF2 and Snrnp35

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001014149.1
• Gene: Snrnp35 / 360803
• RGDID: 1310724
• Length: 244
• Species: Rattus norvegicus
• Alignment Length: 237
• Identity: 47/237 - (19%)
• Similarity: 86/237 - (36%)
• Gaps: 68/237 - (28%)

  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGYDY 69
            ::|..|....:.:.::::|.::|.:..:    ||.......:||:|:::.|....|.:..||...
  Rat    53 LFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVI 117

  Fly    70 DGYRLRVEF----------PR--GGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGL 122
            |.:.:.|::          ||  |||.|.        :...|..|.|||..|.::.....:|...
  Rat   118 DQHEIFVDYELERTLRGWIPRRLGGGLGG--------KKESGQLRFGGRDRPFRKPINLPVVKNE 174

  Fly   123 PASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYI--- 184
            |.....::.::..|.          :|        ||.|.:...:..|..| ..|..:.|.:
  Rat   175 PHREGKRERRERSRS----------RD--------RHWDPRPRERDHDRGR-EKHWQDRARVWPE 220

  Fly   185 ----RVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSR 222
                |.||...:..:                  :||.||||:
  Rat   221 NDWEREREFRDERAK------------------TRDKRDRSK 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	15/84 (18%)
		RRM2_SRSF1_like	115..188	CDD:410013	12/79 (15%)
Snrnp35	NP_001014149.1	RRM	<41..>126	CDD:223796	15/72 (21%)
		RRM_snRNP35	48..137	CDD:240683	15/83 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	146..244		25/142 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900