Protein Alignment SF2 and srsf5a

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_957161.1
• Gene: srsf5a / 335396
• ZFINID: ZDB-GENE-030131-7336
• Length: 259
• Species: Danio rerio
• Alignment Length: 265
• Identity: 103/265 - (38%)
• Similarity: 140/265 - (52%)
• Gaps: 32/265 - (12%)

  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71
            ||:::|.|.|..|.:|::..|..:|::..::|||    .|.||||:|.|||||||...:|.:...
Zfish     4 CRVFIGRLSPHARERDVEKFFKGYGRIREINLKN----GFGFVEFDDYRDADDAVYELNGKELCS 64

  Fly    72 YRLRVEFP-----RGGGPGSYRGGNRNDR------SRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
            .|:.:|..     ||||||  .||..:.|      ||.||.|.   |||. |:::|::|..|.:.
Zfish    65 ERVTIEHARSRRGRGGGPG--MGGRFSPRFGGYRQSRSGGSRY---GPPV-RTEHRIIVENLSSR 123

  Fly   126 GSWQDLKDHMREAGDVCFADTY--KDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
            .|||||||.||:.|:|.|.|.:  |...|||||..|.|||.||:|||.:.....:.::...|.|.
Zfish   124 ISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLKLYEDRKRN 188

  Fly   189 DSGDNDRGGGGGGS-GGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGT----PTYSPVRRQSYSR 248
            .|....|......| ......|...||:    ||||||.|..|.::.|    |:.||..::..||
Zfish   189 RSRSRSRSRSSSRSRSPSRSRSPERGSK----RSRSRSLSRTPEKKSTSNRSPSRSPTPQRKQSR 249

  Fly   249 SRSRS 253
            |||.|
Zfish   250 SRSAS 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	28/77 (36%)
		RRM2_SRSF1_like	115..188	CDD:410013	32/74 (43%)
srsf5a	NP_957161.1	RRM1_SRSF4_like	5..72	CDD:240783	27/70 (39%)
		RRM2_SRSF4_like	113..184	CDD:241044	31/70 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.840