Sequence 1: | NP_001247139.1 | Gene: | SF2 / 53443 | FlyBaseID: | FBgn0283477 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956476.1 | Gene: | tia1l / 323447 | ZFINID: | ZDB-GENE-030131-2167 | Length: | 342 | Species: | Danio rerio |
Alignment Length: | 271 | Identity: | 59/271 - (21%) |
---|---|---|---|
Similarity: | 100/271 - (36%) | Gaps: | 66/271 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVT----FVDLKNRRGPPFAFVEFEDARDADDAVKARD 65
Fly 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQY-RVMVTGLPAS---- 125
Fly 126 --GSWQDLKDH-MREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEV-AYIRV 186
Fly 187 REDSGDNDRGGGGGGSGGGGGGSGGGGSRDY--RDRSRSRSFSSRPR-RRGTPTYS--PVRR--Q 244
Fly 245 SYSRSRSRSNY 255 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF2 | NP_001247139.1 | RRM_SF | 3..80 | CDD:418427 | 22/78 (28%) |
RRM2_SRSF1_like | 115..188 | CDD:410013 | 19/81 (23%) | ||
tia1l | NP_956476.1 | ELAV_HUD_SF | 7..272 | CDD:273741 | 47/222 (21%) |
RRM_SF | 10..90 | CDD:302621 | |||
RRM2_TIA1 | 96..175 | CDD:241062 | 21/79 (27%) | ||
RRM3_TIAR | 206..278 | CDD:241064 | 19/102 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |