Protein Alignment SF2 and Rbmx

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001020834.1
• Gene: Rbmx / 302855
• RGDID: 1565256
• Length: 390
• Species: Rattus norvegicus
• Alignment Length: 379
• Identity: 91/379 - (24%)
• Similarity: 119/379 - (31%)
• Gaps: 157/379 - (41%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGYD 68
            ::::|.|..:...|.::.:|.|:|::..|    |.:..:...||||.||...||.||.:..:|..
  Rat     9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKS 73

  Fly    69 YDGYRLRVEF----------------------PRG--GGPGSYRGGNRNDRSR-----DGG---- 100
            .||..::||.                      |||  ||.|. .||.|...||     |||
  Rat    74 LDGKAIKVEQATKPSFESGRRGLPPPPRSRGPPRGLRGGRGG-SGGTRGPPSRGGHMDDGGYSMN 137

  Fly   101 -------------------------------------GRMGGRGP-----------------PAK 111
                                                 ..||||.|                 |::
  Rat   138 FTLSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDGYGGPPRREPLPSR 202

  Fly   112 RSQY-RVMVTGLPASGSW--------QDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIK 167
            |..| .....|.....|:        :|.:|:.....|.    ||:|       ..|...:
  Rat   203 RDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDY----TYRD-------YGHSSSR---- 252

  Fly   168 KLDDSRFRSHEGEVAYIRVREDSGDNDRGGG-----------------GGGSGGGGGGS------ 209
              ||...|.:.....|.|.| |..|:..||.                 .|.....||.|
  Rat   253 --DDYPSRGYSDRDGYGRER-DYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYS 314

  Fly   210 ----GGGGSRDYRDRSRSRSFSS-RPR----RRGTPT-----YSPVRRQSYSRS 249
                |.|||||....|||..:|| |.|    .||.|.     |.| .|.|||.|
  Rat   315 SSRDGYGGSRDSYTSSRSDLYSSGRDRVGRQERGLPPSMERGYPP-PRDSYSSS 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	23/97 (24%)
		RRM2_SRSF1_like	115..188	CDD:410013	15/81 (19%)
Rbmx	NP_001020834.1	RRM_RBMX_like	7..86	CDD:409816	23/76 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	58..390		77/330 (23%)
		dnaA	165..>302	CDD:455861	28/154 (18%)
		RBM1CTR	173..217	CDD:400429	9/43 (21%)