Protein Alignment SF2 and rna15

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_593884.1
• Gene: rna15 / 2543462
• PomBaseID: SPAC644.16
• Length: 422
• Species: Schizosaccharomyces pombe
• Alignment Length: 189
• Identity: 49/189 - (25%)
• Similarity: 76/189 - (40%)
• Gaps: 38/189 - (20%)

  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKV----TFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
            |.:||||:|.::..:.:.|:|.:.|.|    ..:|.::.:...:.|.|:.|...|..||:..:.|
pombe     5 CVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNLNNY 69

  Fly    68 DYDGYRLRVEFPRGG---------GP---GSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVT 120
            |....||||:||...         ||   |.|.....| :|...|...|...|....:|......
pombe    70 DAGTRRLRVDFPTADQIRRLDKLLGPSRYGYYPQSYAN-QSYTYGNNFGSYPPTQPSTQPLPQSY 133

  Fly   121 GLPA-------SGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKY---AIKKL 169
            |.|:       .||       .|.:|.:...:.|:    |:..|...::.|   |||.|
pombe   134 GYPSYPPAGYRGGS-------ARPSGVLANDEVYR----VLAQLAPNEIDYMLSAIKAL 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	24/76 (32%)
		RRM2_SRSF1_like	115..188	CDD:410013	14/65 (22%)
rna15	NP_593884.1	RRM_CSTF2_RNA15_like	5..80	CDD:409832	23/74 (31%)
		CSTF2_hinge	150..222	CDD:433869	9/36 (25%)