Protein Alignment SF2 and srp2

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_594570.1
• Gene: srp2 / 2542772
• PomBaseID: SPAC16.02c
• Length: 365
• Species: Schizosaccharomyces pombe
• Alignment Length: 312
• Identity: 97/312 - (31%)
• Similarity: 132/312 - (42%)
• Gaps: 80/312 - (25%)

  Fly     5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDY 69
            :|.|::||.:||....:|:.|.|..:|::  :|.|...|  |.|||.||||||.|.|....|.::
pombe     2 SETRLFVGRIPPQATREDMMDFFKGYGQI--LDCKLMNG--FGFVEVEDARDARDIVNDFQGKEF 62

  Fly    70 DGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDH 134
            .|.|:.||..||       ...|.:..|:..   ..:.|..:|:.:|::|..|....|||||||.
pombe    63 MGSRIVVEPARG-------ERRRRENFRESA---ASKYPRPRRTGFRLIVENLSEDVSWQDLKDV 117

  Fly   135 MREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLD-------------------------DS 172
            ||:||:..|.|.:::  |:|||||...|||:.|:..|:                         .|
pombe   118 MRKAGEPTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAVTLREDPDAANEPLPEVPS 182

  Fly   173 RFRSHEGEVAYIRVRED---SGDNDRGGGGGGSGGGGGGSGGG------------GSRD-YRDRS 221
            |||| ....|..|.|:|   .||..|.....|.......:..|            |.|| ||..|
pombe   183 RFRS-RSPPARRRYRDDYRRGGDYRRDAYRPGRDDERRYAPRGEYRRNNRDEYRRGGRDEYRRNS 246

  Fly   222 RS---------------------RSFSSRPRRRGTPTY-SPVRRQSYSRSRS 251
            ||                     |....|.|..|.|:: ...||.:||||.|
pombe   247 RSDYRRPHDDEYRRPRGDEYRPGRDEYRRSRDDGRPSHDDEYRRDAYSRSPS 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	30/74 (41%)
		RRM2_SRSF1_like	115..188	CDD:410013	34/99 (34%)
srp2	NP_594570.1	RRM	2..278	CDD:223796	87/290 (30%)
		RRM_SF	5..69	CDD:302621	27/67 (40%)
		RRM2_SRSF4_like	98..169	CDD:241044	27/70 (39%)
		DUF1777	231..>342	CDD:285811	20/68 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.840