DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and Y57G11A.5

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_502757.2 Gene:Y57G11A.5 / 190364 WormBaseID:WBGene00013293 Length:110 Species:Caenorhabditis elegans


Alignment Length:70 Identity:25/70 - (35%)
Similarity:38/70 - (54%) Gaps:1/70 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            ::||||:|.|...|:|:.:|...|.:..:.:. :|.|.||||.|:....|.||||..:|......
 Worm    18 QVYVGNMPFDATEKEIEAVFSVMGPIKSIWMA-KRPPGFAFVTFKRTVHAFDAVKYLNGKKICDL 81

  Fly    73 RLRVE 77
            ..:||
 Worm    82 EAKVE 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 25/70 (36%)
RRM2_SRSF1_like 115..188 CDD:410013
Y57G11A.5NP_502757.2 RRM_SF 19..87 CDD:473069 25/69 (36%)
Blue background indicates that the domain is not in the aligned region.

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