Protein Alignment SF2 and rsp-3

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001370111.1
• Gene: rsp-3 / 176688
• WormBaseID: WBGene00004700
• Length: 258
• Species: Caenorhabditis elegans
• Alignment Length: 264
• Identity: 153/264 - (57%)
• Similarity: 191/264 - (72%)
• Gaps: 37/264 - (14%)

  Fly     2 GSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
            |...:.::||||||.|:|.|:::|:|||:|::.:||:|:.|||.||||||||.|||:|||:||||
 Worm     4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68

  Fly    67 YDYDGYRLRVEFPRGGGP-----------GSYRGGNRNDRSRDGGGRMGGR-GPPAKRSQYRVMV 119
            |::||.|:||||.||.||           |.:|||:..      |||.||| |.|.:|:.|||:|
 Worm    69 YEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFR------GGRGGGRGGGPQRRTGYRVIV 127

  Fly   120 TGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYI 184
            .|||.:|||||||||||:|||||:||..:||:|||||.|:||:|||::||||::|||||||.|||
 Worm   128 EGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYI 192

  Fly   185 RVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTYSPVRRQSYSRS 249
            |||||:             ..||||||||    |||||||  |.|..||.:|.|||.|.:|.|||
 Worm   193 RVREDN-------------SSGGGSGGGG----RDRSRSR--SPRAERRASPKYSPRRSRSRSRS 238

  Fly   250 RSRS 253
            ||||
 Worm   239 RSRS 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	46/76 (61%)
		RRM2_SRSF1_like	115..188	CDD:410013	54/72 (75%)
rsp-3	NP_001370111.1	RRM1_SRSF1_like	10..80	CDD:409775	44/69 (64%)
		RRM2_SRSF1_like	123..196	CDD:410013	54/72 (75%)