Protein Alignment SF2 and rsp-5

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_495307.3
• Gene: rsp-5 / 174073
• WormBaseID: WBGene00004702
• Length: 208
• Species: Caenorhabditis elegans
• Alignment Length: 233
• Identity: 75/233 - (32%)
• Similarity: 102/233 - (43%)
• Gaps: 33/233 - (14%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG- 71
            |:|:|.:|.:.|.:|::.....:||:..:.:|.    .||||:|||:|||:||....||...:|
 Worm     3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY----GFAFVDFEDSRDAEDACHDLDGKTMEGS 63

  Fly    72 -YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHM 135
             .||.||..||...|:.|.|:|:.|.|....|...|.||.:||:.|             |.|...
 Worm    64 SMRLVVEMARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSR-------------DRKRSR 115

  Fly   136 REAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSR--FRSHEGEVAYIRVREDSGDNDRGGG 198
            |...    ..:.:..|.|.|..|..:.:....|.|..|  .||.....|..|.|..||...:.||
 Worm   116 RSRS----RSSSRSRSPVRESRRRSESRSPSPKRDLKREASRSRSPLPAKDRSRTRSGSPPKNGG 176

  Fly   199 GGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTP 236
            ........|.|   .|||..:||.|||.|.     |:|
 Worm   177 DRKRSVSRGRS---HSRDGSNRSVSRSPSP-----GSP 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	28/73 (38%)
		RRM2_SRSF1_like	115..188	CDD:410013	15/74 (20%)
rsp-5	NP_495307.3	RRM	<3..>77	CDD:223796	30/77 (39%)
		RRM_SF	3..74	CDD:302621	28/74 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910