Protein Alignment SF2 and tiar-1

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 353
• Identity: 69/353 - (19%)
• Similarity: 104/353 - (29%)
• Gaps: 153/353 - (43%)

  Fly     2 GSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVT----FVDLKNRRGPPFAFVEFEDARDADDAVK 62
            ||.....:|||||...:....|..||::.|.||    ..|..|   .|:|||||.|...|..|::
 Worm    41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSN---DPYAFVEFSDHGQASQALQ 102

  Fly    63 ARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGS 127
            ..:........::|.:  ...||..:  ::.|.:|                .:.|.|..|.:...
 Worm   103 TMNKRLLLDREMKVNW--AVEPGQQQ--SKIDTTR----------------HFHVFVGDLSSEVD 147

  Fly   128 WQDLKDHMREAGDVCFADTYKD-------GSGVVEFLRHEDMKYAIKKLD--------------- 170
            .|.|::..:..|||..|...:|       |.|.|.:.:.|:.:.||::::
 Worm   148 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWAT 212

  Fly   171 ----DSRFRSHEGEVAYIRV-REDSGDN------------------------------------- 193
                |....||..|.:|..: .:.||||
 Worm   213 RKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGY 277

  Fly   194 ------------------------------------DRG-------------------------- 196
                                                |.|
 Worm   278 AFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKTGDTGKTPGGSYGYGYGNSSSGGNSQPYSGY 342

  Fly   197 GGGGGSGGGGGGSGGGGSRDYRDRSRSR 224
            ||||..|||.||.|.||....:..:.|:
 Worm   343 GGGGAYGGGQGGGGHGGPGQQQSNANSQ 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	24/80 (30%)
		RRM2_SRSF1_like	115..188	CDD:410013	21/99 (21%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	52/277 (19%)
		RRM2_TIA1_like	136..210	CDD:409789	16/73 (22%)