DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and Rsf1

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_061509636.1 Gene:Rsf1 / 1280099 VectorBaseID:AGAMI1_014631 Length:224 Species:Anopheles gambiae


Alignment Length:263 Identity:81/263 - (30%)
Similarity:103/263 - (39%) Gaps:87/263 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKAR 64
            ||.....|:|||||...::.:|::..|.|:||:..|.:  ...|| |||:|||:..:|:.|....
Mosquito     1 MGDSKGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWV--AFNPPGFAFIEFENKEEAETACDNL 63

  Fly    65 DGYDYDGYRLRVEF------PRGGGPGSYRG-GNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGL 122
            :|.|..|.:||||.      |||...| :|| ..||..|  |||.:||.|   ..|.:|      
Mosquito    64 NGQDILGSKLRVEISKGRRNPRGASRG-FRGPPGRNGGS--GGGSIGGSG---GGSSFR------ 116

  Fly   123 PASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVR 187
              :||    :...|:.|...:......|.|                   |.||.......    |
Mosquito   117 --NGS----RGGFRDGGGSSYRSGSSGGGG-------------------SSFRGGSRSSG----R 152

  Fly   188 EDSGDNDRGGGGG--------------------------------GSGGGGGGSGGGGSRDYRDR 220
            .|.|....|||||                                .|||||||.||||    |.|
Mosquito   153 FDGGYGSSGGGGGRSSGYSRDGGRDGGYGSSGGSFGGGGGYGGGRSSGGGGGGGGGGG----RFR 213

  Fly   221 SRS 223
            |||
Mosquito   214 SRS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 29/83 (35%)
RRM2_SRSF1_like 115..188 CDD:410013 10/72 (14%)
Rsf1XP_061509636.1 None

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